Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922152.1_cds_XP_016470928.1_63326
CDS Infomation

[gene=LOC107793159] [db_xref=GeneID:107793159] [protein=long chain acyl-CoA synthetase 4-like] [protein_id=XP_016470928.1] [location=join(36611..36759,37368..37431,37533..37622,37769..37825,39106..39154,39401..39477,39883..39922,40011..40105,40252..40419,40528..40638,40709..40796,41082..41148,41735..41810,41905..42022,42409..42654,42747..42886,43527..43709,43805..43924,45006..45041)] [gbkey=CDS]
Sequence

ATGGGGGAGAGGTTTATAATTGAGGTTGAACCGGCGAAGCCAGCCAAAGATGGAAAACCG
TCAGTCGGACCGGTTTATCGGAGTTTATTCGCTAAGGACGGGTTTCCACCTCCGGTCGAA
GGCTTAGATAGCTGTTGGGATATTTTCCGTATGTCAGTGGAGAAATATCCCAACAACCGA
ATGCTTGGCCGTCGTAAGTTTGTGGATGGAAAGCCTGGAAAGTATGTGTGGATGACTTAC
AAAGAAGTATATGACATTGTCATAAAAGTAGGAAATGCCATCCGGAACTGTGGTGTGGAA
CAAGGAGGAAAATGTGGTATTTATGGTGCCAACTGCCCTGAGTGGATTATAAGCATGGAG
GCATGCAATGCTCATGGACTCTACTGTGTCCCTCTGTACGACACTTTAGGTGCTGGTGCA
GTGGAATTTATCATTTCCCATGCTGAGGTTTCAATTGCTTTTGTTGAGGAGAAAAAGGTT
CCCGAGCTTTTGAAAACATTTCCAAATGCAGCGAAGTACTTGAAGACGGTTGTGAGTTTC
GGGGAAGTCACTCCTCAACAAAAGGAAGAGGTTGAAAAGTTTGGAGCGGCTCTCTTTTCC
TGGGATGAGTTTCTACAATTAGGAAGCAAAAATCAGTATGATCTTCCAGTGAAAAAGAAG
ACTGATATTTGCACAATAATGTATACTAGTGGAACAACTGGAGAACCCAAGGGTGTGATG
ATTTCGAATAATAGCATTGTTACTCTTATAGCTGGAGTGAAGTGTTTTCTTGAGAGTGTA
CATGAGGCGTTGAACGTGAATGATGTATATCTCTCATATCTTCCCTTGGCACATATCTTT
GATCGGGTGATTGAAGAATGTTTCATTAGTCATGGCGCCTCAATTGGATTTTGGCGAGGG
GATGTCAAGTTACTAACTGAAGACATTGGAGAGCTGAAACCAACTGTCTTCTGCGCAGTA
CCTCGGGTATTAGACAGAATATATTCAGGTTTGCAACAGAAAATTTCTTCAGGGGGTCGG
CTAAGGAGCACACTGTTCAATATTGCATATGCTCGCAAACTTCAATATTTGAAGAGTGGG
TGTAAATATCACGAAGCATCTCCAATTTCCGACAAAGTTGTTTTCAGTAAGGTAAAAGAT
GGGTTAGGAGGCAAAGTGCGTCTTATATTATCTGGAGCAGCACCCCTCTCATCTCATGTG
GAAGCTTTTCTGCGAGTTGTAGCATGTGCTCATGTTCTTCAAGGATATGGTCTGACTGAA
ACTTGTGCTGGTACATTTGTATCACTACCCAACCAATTTGATATGCTTGGTACGGTTGGT
CCTCCTGTGCCCAATGTGGATGTGTGTTTGGAGTCCGTTCCTGAAATGGAATATGACGCT
CTTTCAAGCACGCCACGTGGAGAAATATGCGTGAGGGGTGACACTGTGTTTTCTGGTTAT
TACAAGCGTGAGGACCTCACGAAAGAAGTCATGATTGATGGGTGGTTTCACACAGGGGAT
ATTGGTGAGTGGCAACCAAATGGTAGCTTGAAGATAATTGATCGCAAGAAGAACATTTTC
AAGCTATCACAAGGTGAATATGTTGCAGTCGAAAATTTGGAGAATATATATGGCAATAAT
CCTGTTATTGACTCGATATGGATATATGGAAGCAGCTATGAGTCTTTCCTTGTTGCTGTT
GTTAACCCAAACAAACAAGAGGTTGAAAAATGGGCTAAACAGAATGGCCTCTCTGGGGAT
TTTAATTCCCTATGTGAAAATCCAAAGGTGAAAGAACACATACTAGGGGAGCTCACAAAA
GCTGCAAAAGAGAAGAAGCTGAAGGGCTTTGAGTTCATAAAAGCTCTACACCTTGATCCG
GTGCCATTTGACATGGAACGCGACCTTCTGACTCCAACATTTAAGAAGAAAAGACCACAG
TTACTCAAATACTACAAGGATGTGATTGAAACCATGTACAAGGATGCTAAATGA

Peptide Sequence

PEP ID

XP_016470928.1
PEP Infomation

PREDICTED: long chain acyl-CoA synthetase 4-like [Nicotiana tabacum]
Sequence

MGERFIIEVEPAKPAKDGKPSVGPVYRSLFAKDGFPPPVEGLDSCWDIFRMSVEKYPNNR
MLGRRKFVDGKPGKYVWMTYKEVYDIVIKVGNAIRNCGVEQGGKCGIYGANCPEWIISME
ACNAHGLYCVPLYDTLGAGAVEFIISHAEVSIAFVEEKKVPELLKTFPNAAKYLKTVVSF
GEVTPQQKEEVEKFGAALFSWDEFLQLGSKNQYDLPVKKKTDICTIMYTSGTTGEPKGVM
ISNNSIVTLIAGVKCFLESVHEALNVNDVYLSYLPLAHIFDRVIEECFISHGASIGFWRG
DVKLLTEDIGELKPTVFCAVPRVLDRIYSGLQQKISSGGRLRSTLFNIAYARKLQYLKSG
CKYHEASPISDKVVFSKVKDGLGGKVRLILSGAAPLSSHVEAFLRVVACAHVLQGYGLTE
TCAGTFVSLPNQFDMLGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEICVRGDTVFSGY
YKREDLTKEVMIDGWFHTGDIGEWQPNGSLKIIDRKKNIFKLSQGEYVAVENLENIYGNN
PVIDSIWIYGSSYESFLVAVVNPNKQEVEKWAKQNGLSGDFNSLCENPKVKEHILGELTK
AAKEKKLKGFEFIKALHLDPVPFDMERDLLTPTFKKKRPQLLKYYKDVIETMYKDAK

Transcript Sequence

Gene sequence data has not been registered.